With everything looking good, I used:
• 4 L-braces to attach the unit frame walls together, and 4 more to attach the housing floor (that the motherboard and power supply rest on) to the unit frame walls.
• I used locking latches to attach the control panels to the unit frame. This allowed me to unlock the panels from below and remove them if necessary.
At this point, you can screw down the motherboard, power supply, I-PAC and hard drive to the unit. I would recommend keeping the power supply near the unused side, as shown in the figure below. (I drilled another hold near the supply for airflow; you can probably come up with a better design for your MAME cabinet.) Note that was conservative with my estimates on motherboard and hard drive; the unit could probably hold a much bigger motherboard, and I didn't need to use a compact-flash for my hard drive. Maybe I'll swap it out later.